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Author: search.filters.author.Krajangdara, Tassapon

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    Morphological and molecular insights into diversity of Brevitrygon (Elasmobranchii, Myliobatiformes, Dasyatidae) in Thai waters
    (2026-01-01)
    Wongmanee, Phiphat
    ;
    Khudamrongsawat, Jenjit
    ;
    Krajangdara, Tassapon
    ;
    Senanan, Wansuk
    ;
    Panithanarak, Thadsin
    Stingrays of the genus Brevitrygon in Thailand are captured as bycatch in fisheries, and a proportion of the catch is used for local consumption, but information on their biodiversity remains limited. This study examines the diversity of Brevitrygon species collected from the Gulf of Thailand and the Andaman Sea. A total of 148 specimens were morphologically identified as either Brevitrygon heterura (Bleeker, 1852) or Brevitrygon cf. imbricata, based on diagnostic characters. Morphometric analysis revealed that all specimens more closely resembled B. heterura, with no significant differences between morphotypes or sexes. Genetic analysis based on COI sequences from 39 samples further supported these results. All samples grouped within the B. heterura clade with strong bootstrap support and formed two distinct genetic subgroups corresponding tothe Gulf of Thailand and the Andaman Sea. The mean intraspecific divergence (1.08%) fell within the expected range for population-level variation in elasmobranchs, with interspecific divergence from other Brevitrygon species exceeding 9%. These results indicate that B. heterura in Thai waters likely represents a single species. While both morphometric and genetic data suggest regional differentiation, the observed variation falls within the normal range for a single species, providing no evidence of cryptic diversity. This study underscores the value of integrating morphological and molecular data to better understand population structure and taxonomy in stingrays.
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    DNA barcoding for elasmobranch diversity assessment in Thailand: Its advantages and limitations
    (2025-10-01)
    Khudamrongsawat, Jenjit
    ;
    Krajangdara, Tassapon
    ;
    Panithanarak, Thadsin
    ;
    Karuwancharoen, Ratima
    ;
    Klangnurak, Wanlada
    The assessment of elasmobranch biodiversity in Thailand benefits greatly from the application of DNA barcoding, which helps mitigate the challenge posed by a shortage of expert taxonomists. Fragments of COI and ND2 mitochondrial DNA were examined, and the strengths and weaknesses of these two markers were compared. In this study, DNA products from 153 elasmobranch samples were amplifiable and revealed a total of 28 shark species and 32 batoid species. Many species could be confidently identified as their morphological characteristics aligned with DNA barcodes. However, several exceptions were recognized. The absence of reference sequences for rare species presented a challenge for species verification, and the misidentification of reference sequences, as well as changes in species names due to taxonomic revisions, added complexity when comparing DNA barcoding sequences. Conflicts between morphology and genetics were also observed. While intraspecific genetic variation based on both DNA barcodes generally indicated 0–2% variation, this metric could not always be used for species delimitation. This was particularly true for species displaying low genetic variation among closely related species and species where cryptic diversity remained hidden and yet to be uncovered. In such cases, the morphological characteristics of the samples served as the primary means of species identification. Despite these challenges, DNA barcoding remains an invaluable tool for biodiversity assessment, especially in light of the shortage of skilled experts, and for identification of products made from vulnerable species. However, it is essential to exercise caution and be aware of these complexities in its application.
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    Resolving Species Identification and Distribution Patterns of Neotrygon spp. in Thai Waters: Inefficiency of Morphometric Analysis and the Power of COI Gene Barcoding and Phylogenetics
    (2025-01-01)
    Panithanarak, Thadsin
    ;
    Karuwanjaroen, Ratima
    ;
    Utama, Chanapa
    ;
    Laongmanee, Penchan
    ;
    Meejan, Titirat
    Three species of maskrays in the genus Neotrygon have previously been reported in Thai waters. However, the high morphological similarity among species within the blue-spotted maskray complex (Neotrygon spp.) makes accurate identification challenging. This study aimed to confirm species identification in Neotrygon spp. using morphometric and genetic data and to further examine their phylogenetic relationships in Thai waters by analyzing mitochondrial COI (cytochrome c oxidase subunit I) sequences. Multivariate analysis (PCA) of 37 morphometric characters from 55 specimens proved insufficient for species-level discrimination. However, molecular phylogenetic analysis of 14 unique COI sequences from Thai waters, combined with 61 reference sequences from previously documented related species and closely related species, identified two monophyletic clades. These clades corresponded to two species: N. varidens, found exclusively in the Gulf of Thailand, and N. malaccensis, recorded for the first time in Thailand, occurring in both the Gulf of Thailand and the Andaman Sea. This DNA-based identification provides clear evidence for species boundaries within Thai Neotrygon species and highlights the importance of molecular tools for distinguishing morphologically similar marine species in the Indo-Pacific region.
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    DNA-based species identification of shark fins traded in thai markets
    (2023-08-01)
    Klangnurak, Wanlada
    ;
    Arunrugstichai, Sirachai
    ;
    Manopawitr, Petch
    ;
    Krajangdara, Tassapon
    Shark fins are among the most highly prized seafood products in the world with massive consumption in Asia over the past several decades. The demand for shark fins is a major driver of the enormous population declines of elasmobranchs that are generally vulnerable to overexploitation. This study aims to better understand the species composition of shark fin products in Thailand and their conservation statuses by using DNA-based species identification. Various types and sizes of shark fins were collected from 4 locations in Thailand. DNA barcoding method based on a fragment of the cytochrome c oxidase subunit I (COI) gene was applied to species identification. Fins from at least 15 shark species were found from Thailand’s markets. The spottail shark (Carcharhinus sorrah) and the night shark (Carcharhinus signatus) were the two dominant species presented in this study. 34% of identifiable samples are the species that have not been record in this region. 62% of species detected from the fin samples are categorized under the threatened categories of IUCN Red List. Species composition reported in shark fin products potentially helps indicate the appropriate conservation action and increases awareness from monitoring the trade in elasmobranch products.