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    Genetic loci associated with Fusarium wilt resistance in tomato (Solanum lycopersicum L.) discovered by genome-wide association study
    (2023-12-01)
    Thanyasiriwat, Thanwanit
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    Tongyoo, Pumipat
    ;
    Saman, Prakob
    ;
    Suwor, Patcharaporn
    ;
    Sangdee, Aphidech
    Fusarium wilt (FW), caused by Fusarium oxysporum f. sp. lycopersici (Fol), has impacted global tomato production. This study aims to identify single nucleotide polymorphisms (SNPs) and candidate genes associated with FW resistance against different Fol isolates in tomato accessions using genome-wide association studies (GWAS). Ninety-four tomato accessions were evaluated for FW resistance and subjected to GWAS analysis. Broad-spectrum tomato accessions demonstrated resistance to Fol in at least two isolates, exhibiting a disease severity index (DSI) of 0%. Thirty-two SNP loci were significantly linked to the DSI of Fol isolates TFPK401, BK2269 and NP-T4, clustering on chromosome 6. Among these, 12 common significant SNPs were associated with the DSI of at least two Fol isolates, while four unique SNPs were specific to TFPK401 or NP-T4. Furthermore, candidate genes associated with disease response to Fol infection were identified within a 37.9–41 Mb region flanking the SNPs. These findings contribute to a deeper understanding of resistance mechanisms against Fol infection in tomatoes, potentially aiding the development of effective breeding strategies for Fusarium wilt resistance.
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    Effect of Durio zibethinus Murr. cv. Monthong Rind as a Dietary Ingredient in Feed on the Growth Performance and Disease Resistance Against Aeromonas hydrophila in Red Tilapia (Oreochromis niloticus x Oreochromis mossambicus)
    (2023-04-01)
    Sangkhonkhet, Nataporn
    ;
    Phanchindawan, Naree
    ;
    Lerdsuwan, Saichon
    ;
    Nalinanon, Warrapong
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    Pisuttharachai, Duangjai
    Monthong durian is a durian species mainly cultivated in Thailand. The rind makes up about 60-75% of whole fruit and is often discarded. Here, we evaluated the effect of durian rind, specifically the inner white peel, as a supplement for a fish diet on the growth performance and disease resistance against Aeromonas hydrophila in Red Tilapia. Fish with an initial average weight of 42.68 ± 0.11 g were fed diets supplemented with durian rind at 0, 10, 15, and 20% for 140 days. Subsequent results showed that growth performance in terms of weight gain, average daily gain, length gain, and specific growth rates were not significant among treatments (P > 0.05). In addition, the feed conversion ratio and survival rate of fish fed with diets supplemented with durian rind were also not significantly different from the control (P > 0.05). After the 140-day feeding trial, fish were injected intraperitoneally with A. hydrophila, and the cumulative mortality was recorded for 14 days. The survival rate of fish-fed durian rind-supplemented diets at all levels was higher than that of the control. The highest survival rate and relative survival percentage were fish fed with 10% and 15% durian rind in the diet. Taken together, the white peel of the durian rind can be a potential fish feedstuff and can act as a natural antibiotic to improve fish resistance against A. hydrophila. Recommended level of durian rind supplementation is 10%-15% in the diet which will not affect growth but can enhance disease resistance to A. hydrophila.
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    Genome-wide association study revealed genetic loci for resistance to fusarium wilt in tomato germplasm
    (2023-01-01)
    Kawicha, Praphat
    ;
    Tongyoo, Pumipat
    ;
    Wongpakdee, Somporn
    ;
    Rattanapolsan, Ladawan
    ;
    Duangjit, Janejira
    Tomato Fusarium wilt caused by Fusarium oxysporum f.sp. lycopersici (Fol) constrains tomato production worldwide. Three hundred forty tomato accessions were evaluated for Fusarium wilt resistance and single nucleotide polymorphisms (SNPs) associated with resistance. The disease resistance evaluation revealed that 15, 13, and 15 accessions were identified as Fusarium wilt resistant in Test 1, 2, and Mean data, respectively, with the disease severity index (DSI) ranging from 0-16.7%. A genome-wide association study (GWAS) identified SNPs associated with resistance. Eighteen common SNPs were detected in at least two tests and located on chromosomes 4, 6, 7, 9, and 12. Six unique significant SNPs were found in either Test 1 or 2, located on chromosomes 2, 4, and 7. Candidate genes associated with Fusarium wilt resistance were identi-fied. Notably, two genes encoding leucine-rich repeat-like protein and disease-resistance protein were predicted from the two unique SNPs, solDsnp10606 and solDsnp6266, respectively.